Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb3Q91XZ7 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Gm37684-201ENSMUST00000192779 355 ntBASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Gm43787-201ENSMUST00000197792 1037 ntBASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Gm44845-201ENSMUST00000208773 335 ntBASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Gm5035-201ENSMUST00000215581 927 ntBASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 AC132433.1-201ENSMUST00000221553 1101 ntBASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Gm25857-201ENSMUST00000082788 129 ntBASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb3Q91XZ7 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Gm17150-201ENSMUST00000165577 381 ntBASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Gm35960-201ENSMUST00000202712 767 ntBASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 AC131743.3-201ENSMUST00000222099 662 ntBASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Gm24447-201ENSMUST00000083977 338 ntBASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms