Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Gm12857-201ENSMUST00000117678 592 ntBASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Gm23085-201ENSMUST00000157849 293 ntBASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Gm19459-201ENSMUST00000176240 835 ntBASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Gm8100-201ENSMUST00000182906 988 ntBASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Gm5051-201ENSMUST00000204085 485 ntBASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 AC125486.1-201ENSMUST00000218701 320 ntBASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb5Q91XZ5 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Gm11509-201ENSMUST00000117358 325 ntBASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Gm14724-201ENSMUST00000118400 537 ntBASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Gm6905-201ENSMUST00000205729 511 ntBASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb5Q91XZ5 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdhb5Q91XZ5 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb5Q91XZ5 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb5Q91XZ5 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb5Q91XZ5 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb5Q91XZ5 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdhb5Q91XZ5 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.47□□□□□ -0.09
Pcdhb5Q91XZ5 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb5Q91XZ5 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb5Q91XZ5 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms