Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Trex1Q91XB0 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trex1Q91XB0 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trex1Q91XB0 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Trex1Q91XB0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trex1Q91XB0 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.15
Trex1Q91XB0 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Trex1Q91XB0 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.08□□□□□ -0.15
Trex1Q91XB0 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trex1Q91XB0 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.08□□□□□ -0.16
Trex1Q91XB0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.08□□□□□ -0.16
Trex1Q91XB0 Gm23085-201ENSMUST00000157849 293 ntBASIC14.08□□□□□ -0.16
Trex1Q91XB0 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Gm8100-201ENSMUST00000182906 988 ntBASIC14.08□□□□□ -0.16
Trex1Q91XB0 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.08□□□□□ -0.16
Trex1Q91XB0 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.08□□□□□ -0.16
Trex1Q91XB0 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trex1Q91XB0 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.08□□□□□ -0.16
Trex1Q91XB0 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.08□□□□□ -0.16
Trex1Q91XB0 Gm9826-201ENSMUST00000029124 1299 ntBASIC14.08□□□□□ -0.16
Trex1Q91XB0 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Ginm1-202ENSMUST00000065124 300 ntBASIC14.08□□□□□ -0.16
Trex1Q91XB0 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trex1Q91XB0 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trex1Q91XB0 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.08□□□□□ -0.16
Trex1Q91XB0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.07□□□□□ -0.16
Trex1Q91XB0 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Gm24891-201ENSMUST00000104391 136 ntBASIC14.07□□□□□ -0.16
Trex1Q91XB0 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Gm14724-201ENSMUST00000118400 537 ntBASIC14.07□□□□□ -0.16
Trex1Q91XB0 Gm15131-201ENSMUST00000119124 595 ntBASIC14.07□□□□□ -0.16
Trex1Q91XB0 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Gm8199-201ENSMUST00000121323 823 ntBASIC14.07□□□□□ -0.16
Trex1Q91XB0 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.07□□□□□ -0.16
Trex1Q91XB0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Gm19459-201ENSMUST00000176240 835 ntBASIC14.07□□□□□ -0.16
Trex1Q91XB0 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Mir7032-201ENSMUST00000185154 79 ntBASIC14.07□□□□□ -0.16
Trex1Q91XB0 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.07□□□□□ -0.16
Trex1Q91XB0 AC166992.1-201ENSMUST00000216356 565 ntBASIC14.07□□□□□ -0.16
Trex1Q91XB0 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.07□□□□□ -0.16
Trex1Q91XB0 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trex1Q91XB0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms