Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.75
H1fooQ8VIK3 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Gm13226-201ENSMUST00000117838 404 ntBASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Gm24136-201ENSMUST00000083374 165 ntBASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
H1fooQ8VIK3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Gm25261-201ENSMUST00000157416 134 ntBASIC10.32□□□□□ -0.76
H1fooQ8VIK3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Snora73a-201ENSMUST00000082453 205 ntBASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
H1fooQ8VIK3 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms