Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Gm45925-201ENSMUST00000218882 744 ntBASIC12.75□□□□□ -0.37
Trim60Q8VI40 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.75□□□□□ -0.37
Trim60Q8VI40 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.75□□□□□ -0.37
Trim60Q8VI40 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Gm6091-201ENSMUST00000098307 165 ntBASIC12.75□□□□□ -0.37
Trim60Q8VI40 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.75□□□□□ -0.37
Trim60Q8VI40 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.75□□□□□ -0.37
Trim60Q8VI40 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.74□□□□□ -0.37
Trim60Q8VI40 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim60Q8VI40 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.74□□□□□ -0.37
Trim60Q8VI40 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.74□□□□□ -0.37
Trim60Q8VI40 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Gm13315-201ENSMUST00000120376 991 ntBASIC12.74□□□□□ -0.37
Trim60Q8VI40 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Gm12138-201ENSMUST00000122180 951 ntBASIC12.74□□□□□ -0.37
Trim60Q8VI40 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Gm23119-201ENSMUST00000158610 140 ntBASIC12.74□□□□□ -0.37
Trim60Q8VI40 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Gm44958-201ENSMUST00000203734 736 ntBASIC12.74□□□□□ -0.37
Trim60Q8VI40 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.74□□□□□ -0.37
Trim60Q8VI40 Gm7561-201ENSMUST00000211203 886 ntBASIC12.74□□□□□ -0.37
Trim60Q8VI40 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim60Q8VI40 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim60Q8VI40 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim60Q8VI40 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.74□□□□□ -0.37
Trim60Q8VI40 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim60Q8VI40 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim60Q8VI40 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Gm12314-201ENSMUST00000118104 538 ntBASIC12.73□□□□□ -0.37
Trim60Q8VI40 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Gm9083-201ENSMUST00000120423 819 ntBASIC12.73□□□□□ -0.37
Trim60Q8VI40 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Gm18304-201ENSMUST00000189162 546 ntBASIC12.73□□□□□ -0.37
Trim60Q8VI40 Gm18584-201ENSMUST00000203098 964 ntBASIC12.73□□□□□ -0.37
Trim60Q8VI40 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim60Q8VI40 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 123.4 ms