Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm16372-201ENSMUST00000073088 450 ntBASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa1Q8VEE4 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Gm15968-201ENSMUST00000119342 1168 ntBASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Gm16215-201ENSMUST00000161990 637 ntBASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Gm16107-201ENSMUST00000162523 862 ntBASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Gm27437-201ENSMUST00000183429 107 ntBASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa1Q8VEE4 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 Gm37293-201ENSMUST00000191658 295 ntBASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 Gm40332-201ENSMUST00000199847 938 ntBASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa1Q8VEE4 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms