Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rpap2Q8VC34 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.52□□□□□ -0.24
Rpap2Q8VC34 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rpap2Q8VC34 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rpap2Q8VC34 Gm23270-201ENSMUST00000104055 131 ntBASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Gm11930-201ENSMUST00000117788 190 ntBASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.52□□□□□ -0.25
Rpap2Q8VC34 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpap2Q8VC34 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Gm15198-201ENSMUST00000117283 177 ntBASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Gm18711-201ENSMUST00000199341 750 ntBASIC13.51□□□□□ -0.25
Rpap2Q8VC34 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.51□□□□□ -0.25
Rpap2Q8VC34 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Gm10312-201ENSMUST00000078515 489 ntBASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.51□□□□□ -0.25
Rpap2Q8VC34 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Gm3096-201ENSMUST00000185770 364 ntBASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Gm3961-201ENSMUST00000204425 994 ntBASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Gm45331-201ENSMUST00000209868 554 ntBASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.5□□□□□ -0.25
Rpap2Q8VC34 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpap2Q8VC34 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms