Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ccdc9Q8VC31 Gm28630-201ENSMUST00000187806 498 ntBASIC14.83□□□□□ -0.04
Ccdc9Q8VC31 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Ccdc9Q8VC31 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.83□□□□□ -0.04
Ccdc9Q8VC31 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ccdc9Q8VC31 AC207128.2-201ENSMUST00000223708 1924 ntBASIC14.83□□□□□ -0.04
Ccdc9Q8VC31 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc9Q8VC31 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc9Q8VC31 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc9Q8VC31 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc9Q8VC31 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc9Q8VC31 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc9Q8VC31 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc9Q8VC31 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc9Q8VC31 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc9Q8VC31 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc9Q8VC31 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc9Q8VC31 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc9Q8VC31 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Gm15653-201ENSMUST00000119247 907 ntBASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Gm16476-201ENSMUST00000221544 139 ntBASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Mir125a-201ENSMUST00000083545 68 ntBASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc9Q8VC31 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Gm24543-201ENSMUST00000103867 82 ntBASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc9Q8VC31 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 AC121870.2-201ENSMUST00000214343 1870 ntBASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc9Q8VC31 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms