Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Gm37917-201ENSMUST00000194711 392 ntBASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Gm38671-201ENSMUST00000200573 130 ntBASIC10.04□□□□□ -0.8
Nup35Q8R4R6 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Gm20949-201ENSMUST00000206478 952 ntBASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Gm24526-201ENSMUST00000082921 158 ntBASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Gm8213-201ENSMUST00000118191 441 ntBASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Gm13612-201ENSMUST00000119276 390 ntBASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Gm10156-201ENSMUST00000122364 462 ntBASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Proscos-202ENSMUST00000178990 666 ntBASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Gm8463-201ENSMUST00000208573 613 ntBASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Gm8598-201ENSMUST00000221184 836 ntBASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup35Q8R4R6 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Nup35Q8R4R6 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Nup35Q8R4R6 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Nup35Q8R4R6 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.02□□□□□ -0.8
Nup35Q8R4R6 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Nup35Q8R4R6 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.8
Nup35Q8R4R6 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Nup35Q8R4R6 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Nup35Q8R4R6 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Nup35Q8R4R6 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Nup35Q8R4R6 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Nup35Q8R4R6 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Nup35Q8R4R6 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Nup35Q8R4R6 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms