Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.84□□□□□ -0.19
Ushbp1Q8R370 Gm18212-201ENSMUST00000211678 889 ntBASIC13.84□□□□□ -0.19
Ushbp1Q8R370 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ushbp1Q8R370 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ushbp1Q8R370 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ushbp1Q8R370 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ushbp1Q8R370 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ushbp1Q8R370 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ushbp1Q8R370 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ushbp1Q8R370 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ushbp1Q8R370 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ushbp1Q8R370 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.84□□□□□ -0.19
Ushbp1Q8R370 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ushbp1Q8R370 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ushbp1Q8R370 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ushbp1Q8R370 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ushbp1Q8R370 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ushbp1Q8R370 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ushbp1Q8R370 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.83□□□□□ -0.19
Ushbp1Q8R370 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.83□□□□□ -0.19
Ushbp1Q8R370 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.83□□□□□ -0.19
Ushbp1Q8R370 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.83□□□□□ -0.19
Ushbp1Q8R370 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ushbp1Q8R370 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Gm11439-201ENSMUST00000118598 409 ntBASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Gm45925-201ENSMUST00000218882 744 ntBASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ushbp1Q8R370 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Gm14028-201ENSMUST00000117434 479 ntBASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Gm13736-201ENSMUST00000119272 253 ntBASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Gm18304-201ENSMUST00000189162 546 ntBASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Gm37986-201ENSMUST00000193285 383 ntBASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Ushbp1Q8R370 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ushbp1Q8R370 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ushbp1Q8R370 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ushbp1Q8R370 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ushbp1Q8R370 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ushbp1Q8R370 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ushbp1Q8R370 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ushbp1Q8R370 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ushbp1Q8R370 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.81□□□□□ -0.2
Ushbp1Q8R370 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms