Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 Gm12384-201ENSMUST00000119228 919 ntBASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 Gm22175-201ENSMUST00000175007 78 ntBASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 Gm17837-201ENSMUST00000186435 985 ntBASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 Gm44872-201ENSMUST00000207864 420 ntBASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Ebf4Q8K4J2 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.21□□□□□ -0.62
Ebf4Q8K4J2 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ebf4Q8K4J2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Ebf4Q8K4J2 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ebf4Q8K4J2 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ebf4Q8K4J2 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ebf4Q8K4J2 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Ebf4Q8K4J2 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.62
Ebf4Q8K4J2 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ebf4Q8K4J2 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ebf4Q8K4J2 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Gm44882-201ENSMUST00000205702 802 ntBASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ebf4Q8K4J2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms