Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Gm24830-201ENSMUST00000102024 166 ntBASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Mir1938-201ENSMUST00000158746 100 ntBASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Gm38266-201ENSMUST00000194931 421 ntBASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Gm6334-201ENSMUST00000207083 228 ntBASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Gm21769-201ENSMUST00000211922 111 ntBASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Gm26232-201ENSMUST00000083360 166 ntBASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Mir8109-201ENSMUST00000184375 117 ntBASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Gm27390-201ENSMUST00000184516 176 ntBASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Cts7-204ENSMUST00000225321 1257 ntBASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.78□□□□□ -0.36
Prpf39Q8K2Z2 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Prpf39Q8K2Z2 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prpf39Q8K2Z2 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prpf39Q8K2Z2 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prpf39Q8K2Z2 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Prpf39Q8K2Z2 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prpf39Q8K2Z2 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prpf39Q8K2Z2 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prpf39Q8K2Z2 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Prpf39Q8K2Z2 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms