Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Gm12314-201ENSMUST00000118104 538 ntBASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Gm12241-201ENSMUST00000118330 726 ntBASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rfwd3Q8CIK8 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Gm15198-201ENSMUST00000117283 177 ntBASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Gm13875-201ENSMUST00000120162 282 ntBASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Gm11597-201ENSMUST00000121423 964 ntBASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Gm9630-201ENSMUST00000178304 885 ntBASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Gm2546-201ENSMUST00000182630 991 ntBASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Mir8109-201ENSMUST00000184375 117 ntBASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfwd3Q8CIK8 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms