Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Rbm28Q8CGC6 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rbm28Q8CGC6 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rbm28Q8CGC6 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Rbm28Q8CGC6 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Rbm28Q8CGC6 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rbm28Q8CGC6 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rbm28Q8CGC6 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Gm43138-201ENSMUST00000199123 708 ntBASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rbm28Q8CGC6 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Gm12217-201ENSMUST00000118858 696 ntBASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Gm5070-201ENSMUST00000177599 862 ntBASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rbm28Q8CGC6 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
Rbm28Q8CGC6 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rbm28Q8CGC6 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rbm28Q8CGC6 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Rbm28Q8CGC6 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms