Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrif1Q8CDD9 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Gm43818-201ENSMUST00000200605 466 ntBASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Lrif1Q8CDD9 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Gm12384-201ENSMUST00000119228 919 ntBASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Gm14660-201ENSMUST00000119809 575 ntBASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Gm11803-201ENSMUST00000119966 444 ntBASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Gm22331-201ENSMUST00000158066 136 ntBASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Proscos-202ENSMUST00000178990 666 ntBASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Gm27731-201ENSMUST00000185192 107 ntBASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Gm8598-201ENSMUST00000221184 836 ntBASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms