Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cfap54Q8C6S9 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cfap54Q8C6S9 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.54□□□□□ -0.56
Cfap54Q8C6S9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cfap54Q8C6S9 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cfap54Q8C6S9 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Cfap54Q8C6S9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cfap54Q8C6S9 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Gm12663-201ENSMUST00000118481 958 ntBASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Gng5-ps-201ENSMUST00000120931 205 ntBASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Gm6322-201ENSMUST00000118789 1004 ntBASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Gm42816-201ENSMUST00000198433 325 ntBASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 AC130477.1-201ENSMUST00000226982 420 ntBASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Mir6941-201ENSMUST00000184711 59 ntBASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Gm29499-201ENSMUST00000189151 486 ntBASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Gm28329-201ENSMUST00000191208 689 ntBASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Gm29171-201ENSMUST00000191397 486 ntBASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cfap54Q8C6S9 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cfap54Q8C6S9 Map1b-203ENSMUST00000223725 2669 ntBASIC11.52□□□□□ -0.56
Cfap54Q8C6S9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cfap54Q8C6S9 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cfap54Q8C6S9 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Cfap54Q8C6S9 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cfap54Q8C6S9 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.52□□□□□ -0.56
Cfap54Q8C6S9 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Cfap54Q8C6S9 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cfap54Q8C6S9 Gm22594-201ENSMUST00000104251 130 ntBASIC11.52□□□□□ -0.56
Cfap54Q8C6S9 Gm11500-201ENSMUST00000118237 601 ntBASIC11.52□□□□□ -0.56
Cfap54Q8C6S9 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.52□□□□□ -0.56
Cfap54Q8C6S9 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cfap54Q8C6S9 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cfap54Q8C6S9 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC11.52□□□□□ -0.56
Cfap54Q8C6S9 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Cfap54Q8C6S9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cfap54Q8C6S9 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cfap54Q8C6S9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cfap54Q8C6S9 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.52□□□□□ -0.57
Cfap54Q8C6S9 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cfap54Q8C6S9 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cfap54Q8C6S9 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cfap54Q8C6S9 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.52□□□□□ -0.57
Cfap54Q8C6S9 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.52□□□□□ -0.57
Cfap54Q8C6S9 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cfap54Q8C6S9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.52□□□□□ -0.57
Cfap54Q8C6S9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC11.52□□□□□ -0.57
Cfap54Q8C6S9 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.52□□□□□ -0.57
Cfap54Q8C6S9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cfap54Q8C6S9 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cfap54Q8C6S9 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cfap54Q8C6S9 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 116.1 ms