Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Gm15370-201ENSMUST00000117158 253 ntBASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Gm13297-201ENSMUST00000120205 934 ntBASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Gm14832-201ENSMUST00000121289 322 ntBASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Gm37489-201ENSMUST00000191883 159 ntBASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Gm10478-201ENSMUST00000084451 396 ntBASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trub1Q8C0D0 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.69□□□□□ -0.38
Trub1Q8C0D0 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Gm5186-201ENSMUST00000218781 920 ntBASIC12.69□□□□□ -0.38
Trub1Q8C0D0 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.69□□□□□ -0.38
Trub1Q8C0D0 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trub1Q8C0D0 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Map1b-203ENSMUST00000223725 2669 ntBASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.68□□□□□ -0.38
Trub1Q8C0D0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms