Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm14982-201ENSMUST00000121102 442 ntBASIC13.82□□□□□ -0.2
Trim35Q8C006 Gm8224-201ENSMUST00000166178 497 ntBASIC13.82□□□□□ -0.2
Trim35Q8C006 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim35Q8C006 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC13.82□□□□□ -0.2
Trim35Q8C006 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Trim35Q8C006 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim35Q8C006 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim35Q8C006 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC13.82□□□□□ -0.2
Trim35Q8C006 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim35Q8C006 Gm18510-201ENSMUST00000219335 1096 ntBASIC13.82□□□□□ -0.2
Trim35Q8C006 Gm9229-201ENSMUST00000222777 126 ntBASIC13.82□□□□□ -0.2
Trim35Q8C006 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.82□□□□□ -0.2
Trim35Q8C006 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trim35Q8C006 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim35Q8C006 Olfr24-201ENSMUST00000066997 1157 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trim35Q8C006 Gm7099-201ENSMUST00000080066 554 ntBASIC13.82□□□□□ -0.2
Trim35Q8C006 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim35Q8C006 Tatdn3-202ENSMUST00000085633 1089 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim35Q8C006 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trim35Q8C006 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim35Q8C006 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim35Q8C006 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim35Q8C006 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim35Q8C006 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim35Q8C006 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Trim35Q8C006 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trim35Q8C006 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Trim35Q8C006 Gm12225-201ENSMUST00000117995 298 ntBASIC13.81□□□□□ -0.2
Trim35Q8C006 Gm9392-201ENSMUST00000119337 554 ntBASIC13.81□□□□□ -0.2
Trim35Q8C006 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.81□□□□□ -0.2
Trim35Q8C006 Gm14411-201ENSMUST00000121798 914 ntBASIC13.81□□□□□ -0.2
Trim35Q8C006 Gm13776-201ENSMUST00000122236 1261 ntBASIC13.81□□□□□ -0.2
Trim35Q8C006 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.81□□□□□ -0.2
Trim35Q8C006 Crem-209ENSMUST00000129435 1160 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim35Q8C006 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC13.81□□□□□ -0.2
Trim35Q8C006 5730420D15Rik-201ENSMUST00000181781 1182 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Gm29354-201ENSMUST00000187613 696 ntBASIC13.81□□□□□ -0.2
Trim35Q8C006 Gm43237-201ENSMUST00000196835 1044 ntBASIC13.81□□□□□ -0.2
Trim35Q8C006 Gm43035-201ENSMUST00000197626 517 ntBASIC13.81□□□□□ -0.2
Trim35Q8C006 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim35Q8C006 Gm42926-201ENSMUST00000200496 697 ntBASIC13.81□□□□□ -0.2
Trim35Q8C006 AU022133-201ENSMUST00000200601 873 ntBASIC13.81□□□□□ -0.2
Trim35Q8C006 Gm43578-201ENSMUST00000201250 459 ntBASIC13.81□□□□□ -0.2
Trim35Q8C006 Gm44940-201ENSMUST00000206225 1247 ntBASIC13.81□□□□□ -0.2
Trim35Q8C006 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim35Q8C006 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim35Q8C006 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim35Q8C006 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC13.81□□□□□ -0.2
Trim35Q8C006 AC163621.2-201ENSMUST00000222229 682 ntBASIC13.81□□□□□ -0.2
Trim35Q8C006 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.81□□□□□ -0.2
Trim35Q8C006 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trim35Q8C006 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim35Q8C006 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
Trim35Q8C006 Gm15182-201ENSMUST00000120832 1676 ntBASIC13.81□□□□□ -0.2
Trim35Q8C006 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim35Q8C006 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Gm7951-201ENSMUST00000171388 1408 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim35Q8C006 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim35Q8C006 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim35Q8C006 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim35Q8C006 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trim35Q8C006 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim35Q8C006 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.8□□□□□ -0.2
Trim35Q8C006 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim35Q8C006 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim35Q8C006 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.8□□□□□ -0.2
Trim35Q8C006 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim35Q8C006 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim35Q8C006 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim35Q8C006 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC13.8□□□□□ -0.2
Trim35Q8C006 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms