Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Gm9022-201ENSMUST00000182482 992 ntBASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Gm27331-201ENSMUST00000183705 60 ntBASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Gm27892-201ENSMUST00000185017 106 ntBASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cpsf7Q8BTV2 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Gm12928-201ENSMUST00000117115 573 ntBASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Rmrp-201ENSMUST00000157463 271 ntBASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.35□□□□□ -0.43
Cpsf7Q8BTV2 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.34□□□□□ -0.43
Cpsf7Q8BTV2 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf7Q8BTV2 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf7Q8BTV2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf7Q8BTV2 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.34□□□□□ -0.43
Cpsf7Q8BTV2 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cpsf7Q8BTV2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.34□□□□□ -0.43
Cpsf7Q8BTV2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf7Q8BTV2 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf7Q8BTV2 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf7Q8BTV2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf7Q8BTV2 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms