Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm9089-201ENSMUST00000122027 526 ntBASIC17.2■□□□□ 0.34
Usp54Q8BL06 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC17.2■□□□□ 0.34
Usp54Q8BL06 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp54Q8BL06 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp54Q8BL06 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC17.2■□□□□ 0.34
Usp54Q8BL06 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Usp54Q8BL06 Gm9111-201ENSMUST00000219394 709 ntBASIC17.2■□□□□ 0.34
Usp54Q8BL06 Gm18968-201ENSMUST00000221319 862 ntBASIC17.2■□□□□ 0.34
Usp54Q8BL06 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp54Q8BL06 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp54Q8BL06 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp54Q8BL06 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC17.2■□□□□ 0.34
Usp54Q8BL06 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Usp54Q8BL06 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp54Q8BL06 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp54Q8BL06 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC17.2■□□□□ 0.34
Usp54Q8BL06 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp54Q8BL06 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Usp54Q8BL06 Gm45199-201ENSMUST00000207640 1507 ntBASIC17.2■□□□□ 0.34
Usp54Q8BL06 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp54Q8BL06 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Usp54Q8BL06 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Usp54Q8BL06 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp54Q8BL06 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC17.19■□□□□ 0.34
Usp54Q8BL06 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Gm18059-201ENSMUST00000208073 580 ntBASIC17.19■□□□□ 0.34
Usp54Q8BL06 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp54Q8BL06 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Gm4900-201ENSMUST00000222046 1628 ntBASIC17.19■□□□□ 0.34
Usp54Q8BL06 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Gm24398-201ENSMUST00000157870 109 ntBASIC17.19■□□□□ 0.34
Usp54Q8BL06 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC17.19■□□□□ 0.34
Usp54Q8BL06 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Gm43852-201ENSMUST00000202098 917 ntBASIC17.19■□□□□ 0.34
Usp54Q8BL06 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Mir483-201ENSMUST00000093631 73 ntBASIC17.19■□□□□ 0.34
Usp54Q8BL06 Gm8325-201ENSMUST00000099086 453 ntBASIC17.19■□□□□ 0.34
Usp54Q8BL06 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Usp54Q8BL06 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Gm13347-201ENSMUST00000120298 1353 ntBASIC17.18■□□□□ 0.34
Usp54Q8BL06 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Gm13600-201ENSMUST00000117949 744 ntBASIC17.18■□□□□ 0.34
Usp54Q8BL06 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp54Q8BL06 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Ighv2-1-201ENSMUST00000170946 353 ntBASIC17.18■□□□□ 0.34
Usp54Q8BL06 Gm19015-201ENSMUST00000184002 1189 ntBASIC17.18■□□□□ 0.34
Usp54Q8BL06 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Gm17825-201ENSMUST00000206836 794 ntBASIC17.18■□□□□ 0.34
Usp54Q8BL06 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Lgi3-203ENSMUST00000226548 1001 ntBASIC17.18■□□□□ 0.34
Usp54Q8BL06 AC102368.1-201ENSMUST00000227161 892 ntBASIC17.18■□□□□ 0.34
Usp54Q8BL06 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms