Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Smndc1Q8BGT7 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smndc1Q8BGT7 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smndc1Q8BGT7 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smndc1Q8BGT7 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smndc1Q8BGT7 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.02□□□□□ -0.48
Smndc1Q8BGT7 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Smndc1Q8BGT7 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Gm26464-201ENSMUST00000157094 305 ntBASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Gm19087-201ENSMUST00000191430 946 ntBASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Gm17794-201ENSMUST00000220252 955 ntBASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smndc1Q8BGT7 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Gm15371-201ENSMUST00000117057 784 ntBASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Gm13829-201ENSMUST00000119600 138 ntBASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Gm6266-201ENSMUST00000203844 806 ntBASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.01□□□□□ -0.49
Smndc1Q8BGT7 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms