Protein–RNA interactions for Protein: Q810N9

Ccdc172, Coiled-coil domain-containing protein 172, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc172Q810N9 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Gm23270-201ENSMUST00000104055 131 ntBASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Gm24255-201ENSMUST00000104481 128 ntBASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Gm15547-201ENSMUST00000122152 333 ntBASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.04□□□□□ -0.16
Ccdc172Q810N9 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc172Q810N9 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.03□□□□□ -0.16
Ccdc172Q810N9 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccdc172Q810N9 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc172Q810N9 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc172Q810N9 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc172Q810N9 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc172Q810N9 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc172Q810N9 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc172Q810N9 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc172Q810N9 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc172Q810N9 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc172Q810N9 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc172Q810N9 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc172Q810N9 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc172Q810N9 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc172Q810N9 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc172Q810N9 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc172Q810N9 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc172Q810N9 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc172Q810N9 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc172Q810N9 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.03□□□□□ -0.16
Ccdc172Q810N9 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.03□□□□□ -0.16
Ccdc172Q810N9 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc172Q810N9 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc172Q810N9 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc172Q810N9 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc172Q810N9 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc172Q810N9 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Ccdc172Q810N9 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc172Q810N9 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc172Q810N9 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc172Q810N9 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc172Q810N9 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc172Q810N9 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.02□□□□□ -0.16
Ccdc172Q810N9 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc172Q810N9 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.02□□□□□ -0.17
Ccdc172Q810N9 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ccdc172Q810N9 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc172Q810N9 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc172Q810N9 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.02□□□□□ -0.17
Ccdc172Q810N9 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.02□□□□□ -0.17
Ccdc172Q810N9 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.02□□□□□ -0.17
Ccdc172Q810N9 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc172Q810N9 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.02□□□□□ -0.17
Ccdc172Q810N9 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.02□□□□□ -0.17
Ccdc172Q810N9 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc172Q810N9 Gm8712-201ENSMUST00000221090 701 ntBASIC14.02□□□□□ -0.17
Ccdc172Q810N9 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc172Q810N9 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc172Q810N9 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc172Q810N9 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc172Q810N9 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc172Q810N9 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc172Q810N9 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc172Q810N9 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc172Q810N9 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc172Q810N9 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc172Q810N9 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc172Q810N9 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc172Q810N9 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc172Q810N9 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc172Q810N9 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc172Q810N9 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc172Q810N9 Gm24934-201ENSMUST00000103764 111 ntBASIC14.01□□□□□ -0.17
Ccdc172Q810N9 Gm22323-201ENSMUST00000103832 109 ntBASIC14.01□□□□□ -0.17
Ccdc172Q810N9 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms