Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gm23270-201ENSMUST00000104055 131 ntBASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Gm11930-201ENSMUST00000117788 190 ntBASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Gm14247-201ENSMUST00000120950 237 ntBASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Gm3096-201ENSMUST00000185770 364 ntBASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Gm31256-201ENSMUST00000194705 506 ntBASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Gm38266-201ENSMUST00000194931 421 ntBASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.31□□□□□ -0.44
Rpp38Q80UU2 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.31□□□□□ -0.44
Rpp38Q80UU2 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Gm10312-201ENSMUST00000078515 489 ntBASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rpp38Q80UU2 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpp38Q80UU2 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms