Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Gm26035-201ENSMUST00000083065 308 ntBASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Gm14028-201ENSMUST00000117434 479 ntBASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Gm13996-201ENSMUST00000118456 430 ntBASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Gm27341-201ENSMUST00000183570 106 ntBASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh19Q80TF3 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Gm38116-201ENSMUST00000193873 1533 ntBASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Gm16505-201ENSMUST00000179981 232 ntBASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Gm18827-201ENSMUST00000188341 790 ntBASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Gm17812-201ENSMUST00000204935 318 ntBASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Gm45433-201ENSMUST00000209386 247 ntBASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Gm6991-201ENSMUST00000218475 1178 ntBASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh19Q80TF3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms