Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ush1gQ80T11 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Ush1gQ80T11 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ush1gQ80T11 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.51□□□□□ -0.25
Ush1gQ80T11 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.51□□□□□ -0.25
Ush1gQ80T11 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.51□□□□□ -0.25
Ush1gQ80T11 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Gm39404-201ENSMUST00000216350 313 ntBASIC13.51□□□□□ -0.25
Ush1gQ80T11 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ush1gQ80T11 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Ush1gQ80T11 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Ush1gQ80T11 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.5□□□□□ -0.25
Ush1gQ80T11 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ush1gQ80T11 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ush1gQ80T11 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Gm7003-201ENSMUST00000195089 312 ntBASIC13.5□□□□□ -0.25
Ush1gQ80T11 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.5□□□□□ -0.25
Ush1gQ80T11 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Gm10076-201ENSMUST00000073238 384 ntBASIC13.5□□□□□ -0.25
Ush1gQ80T11 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ush1gQ80T11 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Gm24231-201ENSMUST00000104315 133 ntBASIC13.49□□□□□ -0.25
Ush1gQ80T11 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Gm13408-201ENSMUST00000119822 798 ntBASIC13.49□□□□□ -0.25
Ush1gQ80T11 Gm13935-201ENSMUST00000121859 798 ntBASIC13.49□□□□□ -0.25
Ush1gQ80T11 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.49□□□□□ -0.25
Ush1gQ80T11 AY036118-201ENSMUST00000200021 923 ntBASIC13.49□□□□□ -0.25
Ush1gQ80T11 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Gm26035-201ENSMUST00000083065 308 ntBASIC13.49□□□□□ -0.25
Ush1gQ80T11 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ush1gQ80T11 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms