Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.44□□□□□ -0.74
Rif1Q6PR54 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Gm14193-201ENSMUST00000105067 153 ntBASIC10.44□□□□□ -0.74
Rif1Q6PR54 Gm8199-201ENSMUST00000121323 823 ntBASIC10.44□□□□□ -0.74
Rif1Q6PR54 Gm5395-201ENSMUST00000121650 915 ntBASIC10.44□□□□□ -0.74
Rif1Q6PR54 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.44□□□□□ -0.74
Rif1Q6PR54 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Gm5210-201ENSMUST00000182150 1010 ntBASIC10.44□□□□□ -0.74
Rif1Q6PR54 Gm28882-201ENSMUST00000185504 314 ntBASIC10.44□□□□□ -0.74
Rif1Q6PR54 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Gm34379-201ENSMUST00000195036 290 ntBASIC10.44□□□□□ -0.74
Rif1Q6PR54 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.44□□□□□ -0.74
Rif1Q6PR54 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rif1Q6PR54 Gm37297-201ENSMUST00000192974 2384 ntBASIC10.44□□□□□ -0.74
Rif1Q6PR54 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Gm27956-201ENSMUST00000175604 260 ntBASIC10.43□□□□□ -0.74
Rif1Q6PR54 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC10.43□□□□□ -0.74
Rif1Q6PR54 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.43□□□□□ -0.74
Rif1Q6PR54 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Gm5449-201ENSMUST00000081132 357 ntBASIC10.43□□□□□ -0.74
Rif1Q6PR54 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Gm23062-201ENSMUST00000102349 110 ntBASIC10.43□□□□□ -0.74
Rif1Q6PR54 Gm14892-201ENSMUST00000117636 267 ntBASIC10.43□□□□□ -0.74
Rif1Q6PR54 Defa-ps16-201ENSMUST00000121939 171 ntBASIC10.43□□□□□ -0.74
Rif1Q6PR54 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.43□□□□□ -0.74
Rif1Q6PR54 Gm3017-201ENSMUST00000203603 1126 ntBASIC10.43□□□□□ -0.74
Rif1Q6PR54 Gm9204-201ENSMUST00000212641 947 ntBASIC10.43□□□□□ -0.74
Rif1Q6PR54 Gm4811-201ENSMUST00000220879 1220 ntBASIC10.43□□□□□ -0.74
Rif1Q6PR54 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.43□□□□□ -0.74
Rif1Q6PR54 AC138716.2-201ENSMUST00000226670 1016 ntBASIC10.43□□□□□ -0.74
Rif1Q6PR54 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rif1Q6PR54 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms