Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Gm11628-201ENSMUST00000117568 171 ntBASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Gm37981-201ENSMUST00000194280 535 ntBASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Gm4978-201ENSMUST00000071565 801 ntBASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Gm14132-201ENSMUST00000117188 1719 ntBASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Gm18198-201ENSMUST00000204986 1551 ntBASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Gm37028-201ENSMUST00000194276 107 ntBASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Gm45120-201ENSMUST00000208880 408 ntBASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd4Q6PDQ2 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 AC113082.1-201ENSMUST00000217324 327 ntBASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Gm13384-201ENSMUST00000117166 1344 ntBASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Gm11422-201ENSMUST00000118925 1103 ntBASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Gm11783-201ENSMUST00000119549 885 ntBASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Gm11244-201ENSMUST00000121243 237 ntBASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Gm4654-201ENSMUST00000183305 982 ntBASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Gm3793-201ENSMUST00000204973 672 ntBASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Gm3619-201ENSMUST00000219947 775 ntBASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC15.78■□□□□ 0.12
Chd4Q6PDQ2 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms