Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.16□□□□□ -0.3
ShbQ6PD21 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.16□□□□□ -0.3
ShbQ6PD21 Gm23105-201ENSMUST00000083719 134 ntBASIC13.16□□□□□ -0.3
ShbQ6PD21 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ShbQ6PD21 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ShbQ6PD21 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ShbQ6PD21 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ShbQ6PD21 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ShbQ6PD21 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ShbQ6PD21 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ShbQ6PD21 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.16□□□□□ -0.3
ShbQ6PD21 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ShbQ6PD21 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ShbQ6PD21 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.16□□□□□ -0.3
ShbQ6PD21 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
ShbQ6PD21 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
ShbQ6PD21 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ShbQ6PD21 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ShbQ6PD21 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ShbQ6PD21 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ShbQ6PD21 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ShbQ6PD21 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.15□□□□□ -0.3
ShbQ6PD21 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ShbQ6PD21 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
ShbQ6PD21 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ShbQ6PD21 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.15□□□□□ -0.3
ShbQ6PD21 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
ShbQ6PD21 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ShbQ6PD21 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ShbQ6PD21 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ShbQ6PD21 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.15□□□□□ -0.3
ShbQ6PD21 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.15□□□□□ -0.3
ShbQ6PD21 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ShbQ6PD21 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
ShbQ6PD21 Gm25053-201ENSMUST00000103982 133 ntBASIC13.15□□□□□ -0.3
ShbQ6PD21 Gm25922-201ENSMUST00000104281 130 ntBASIC13.15□□□□□ -0.3
ShbQ6PD21 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC13.15□□□□□ -0.3
ShbQ6PD21 Gm9089-201ENSMUST00000122027 526 ntBASIC13.15□□□□□ -0.3
ShbQ6PD21 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ShbQ6PD21 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ShbQ6PD21 Gm22846-201ENSMUST00000157706 270 ntBASIC13.15□□□□□ -0.3
ShbQ6PD21 Gm24679-201ENSMUST00000158762 111 ntBASIC13.15□□□□□ -0.3
ShbQ6PD21 Gm18776-201ENSMUST00000188833 654 ntBASIC13.15□□□□□ -0.3
ShbQ6PD21 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ShbQ6PD21 Gm9916-201ENSMUST00000192943 1228 ntBASIC13.15□□□□□ -0.3
ShbQ6PD21 Gm25053-202ENSMUST00000199731 132 ntBASIC13.15□□□□□ -0.3
ShbQ6PD21 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC13.15□□□□□ -0.3
ShbQ6PD21 AC158388.3-202ENSMUST00000225517 775 ntBASIC13.15□□□□□ -0.3
ShbQ6PD21 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ShbQ6PD21 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ShbQ6PD21 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
ShbQ6PD21 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
ShbQ6PD21 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ShbQ6PD21 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ShbQ6PD21 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.15□□□□□ -0.3
ShbQ6PD21 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ShbQ6PD21 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ShbQ6PD21 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ShbQ6PD21 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ShbQ6PD21 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ShbQ6PD21 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.15□□□□□ -0.3
ShbQ6PD21 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.15□□□□□ -0.3
ShbQ6PD21 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ShbQ6PD21 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ShbQ6PD21 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ShbQ6PD21 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ShbQ6PD21 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
ShbQ6PD21 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.31
ShbQ6PD21 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
ShbQ6PD21 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
ShbQ6PD21 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ShbQ6PD21 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
ShbQ6PD21 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ShbQ6PD21 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ShbQ6PD21 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.14□□□□□ -0.31
ShbQ6PD21 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
ShbQ6PD21 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ShbQ6PD21 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ShbQ6PD21 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ShbQ6PD21 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
ShbQ6PD21 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
ShbQ6PD21 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
ShbQ6PD21 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
ShbQ6PD21 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC13.14□□□□□ -0.31
ShbQ6PD21 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.14□□□□□ -0.31
ShbQ6PD21 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ShbQ6PD21 Gm22379-201ENSMUST00000157480 131 ntBASIC13.14□□□□□ -0.31
ShbQ6PD21 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ShbQ6PD21 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ShbQ6PD21 Gm17070-201ENSMUST00000170463 784 ntBASIC13.14□□□□□ -0.31
ShbQ6PD21 Gm25998-201ENSMUST00000175397 53 ntBASIC13.14□□□□□ -0.31
ShbQ6PD21 AC238811.4-201ENSMUST00000178019 1246 ntBASIC13.14□□□□□ -0.31
ShbQ6PD21 AC238940.3-201ENSMUST00000178830 1246 ntBASIC13.14□□□□□ -0.31
ShbQ6PD21 Gm5706-201ENSMUST00000181525 993 ntBASIC13.14□□□□□ -0.31
ShbQ6PD21 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC13.14□□□□□ -0.31
ShbQ6PD21 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC13.14□□□□□ -0.31
ShbQ6PD21 Gm37638-201ENSMUST00000194337 1123 ntBASIC13.14□□□□□ -0.31
ShbQ6PD21 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.14□□□□□ -0.31
ShbQ6PD21 Trav11n-201ENSMUST00000200113 343 ntBASIC13.14□□□□□ -0.31
ShbQ6PD21 Gm7082-201ENSMUST00000209880 969 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms