Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Rmrp-201ENSMUST00000157463 271 ntBASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Gm9002-201ENSMUST00000178437 499 ntBASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Gm27486-201ENSMUST00000184923 80 ntBASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Smarcd3Q6P9Z1 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Gm12138-201ENSMUST00000122180 951 ntBASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Gm38092-201ENSMUST00000195600 653 ntBASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smarcd3Q6P9Z1 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.29□□□□□ -0.6
Smarcd3Q6P9Z1 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms