Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC11.26□□□□□ -0.61
VcanQ62059 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.26□□□□□ -0.61
VcanQ62059 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
VcanQ62059 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
VcanQ62059 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.25□□□□□ -0.61
VcanQ62059 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
VcanQ62059 Gm7939-201ENSMUST00000201233 1050 ntBASIC11.25□□□□□ -0.61
VcanQ62059 BC080696-201ENSMUST00000202858 1218 ntBASIC11.25□□□□□ -0.61
VcanQ62059 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC11.25□□□□□ -0.61
VcanQ62059 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
VcanQ62059 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
VcanQ62059 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.25□□□□□ -0.61
VcanQ62059 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.25□□□□□ -0.61
VcanQ62059 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
VcanQ62059 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Gm14942-201ENSMUST00000119642 336 ntBASIC11.25□□□□□ -0.61
VcanQ62059 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
VcanQ62059 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.25□□□□□ -0.61
VcanQ62059 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
VcanQ62059 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VcanQ62059 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
VcanQ62059 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
VcanQ62059 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
VcanQ62059 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.24□□□□□ -0.61
VcanQ62059 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Gm15626-201ENSMUST00000117478 868 ntBASIC11.24□□□□□ -0.61
VcanQ62059 Gm11736-201ENSMUST00000121468 505 ntBASIC11.24□□□□□ -0.61
VcanQ62059 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.24□□□□□ -0.61
VcanQ62059 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
VcanQ62059 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.24□□□□□ -0.61
VcanQ62059 Gm5267-201ENSMUST00000191574 1045 ntBASIC11.24□□□□□ -0.61
VcanQ62059 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC11.24□□□□□ -0.61
VcanQ62059 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.24□□□□□ -0.61
VcanQ62059 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.24□□□□□ -0.61
VcanQ62059 Gm5451-201ENSMUST00000080545 579 ntBASIC11.24□□□□□ -0.61
VcanQ62059 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC11.24□□□□□ -0.61
VcanQ62059 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.24□□□□□ -0.61
VcanQ62059 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
VcanQ62059 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
VcanQ62059 Gm33707-201ENSMUST00000195135 569 ntBASIC11.24□□□□□ -0.61
VcanQ62059 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
VcanQ62059 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
VcanQ62059 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
VcanQ62059 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
VcanQ62059 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.24□□□□□ -0.61
VcanQ62059 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.24□□□□□ -0.61
VcanQ62059 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms