Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 Gm9083-201ENSMUST00000120423 819 ntBASIC13.62□□□□□ -0.23
Ift88Q61371 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.62□□□□□ -0.23
Ift88Q61371 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 Gm29649-201ENSMUST00000185649 419 ntBASIC13.62□□□□□ -0.23
Ift88Q61371 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 Gm10268-201ENSMUST00000085340 555 ntBASIC13.62□□□□□ -0.23
Ift88Q61371 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Ift88Q61371 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ift88Q61371 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ift88Q61371 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift88Q61371 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ift88Q61371 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift88Q61371 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift88Q61371 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift88Q61371 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ift88Q61371 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.61□□□□□ -0.23
Ift88Q61371 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift88Q61371 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift88Q61371 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift88Q61371 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ift88Q61371 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift88Q61371 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Ift88Q61371 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.61□□□□□ -0.23
Ift88Q61371 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.61□□□□□ -0.23
Ift88Q61371 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.61□□□□□ -0.23
Ift88Q61371 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.61□□□□□ -0.23
Ift88Q61371 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.61□□□□□ -0.23
Ift88Q61371 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ift88Q61371 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.61□□□□□ -0.23
Ift88Q61371 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift88Q61371 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ift88Q61371 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Ift88Q61371 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ift88Q61371 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Ift88Q61371 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ift88Q61371 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ift88Q61371 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift88Q61371 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift88Q61371 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Ift88Q61371 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift88Q61371 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ift88Q61371 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift88Q61371 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift88Q61371 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ift88Q61371 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.61□□□□□ -0.23
Ift88Q61371 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.61□□□□□ -0.23
Ift88Q61371 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift88Q61371 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ift88Q61371 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.6□□□□□ -0.23
Ift88Q61371 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ift88Q61371 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ift88Q61371 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ift88Q61371 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ift88Q61371 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ift88Q61371 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Ift88Q61371 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ift88Q61371 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.6□□□□□ -0.23
Ift88Q61371 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ift88Q61371 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ift88Q61371 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ift88Q61371 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.6□□□□□ -0.23
Ift88Q61371 Gm12502-201ENSMUST00000120197 444 ntBASIC13.6□□□□□ -0.23
Ift88Q61371 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ift88Q61371 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ift88Q61371 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ift88Q61371 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.6□□□□□ -0.23
Ift88Q61371 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ift88Q61371 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ift88Q61371 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.6□□□□□ -0.23
Ift88Q61371 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.6□□□□□ -0.23
Ift88Q61371 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ift88Q61371 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ift88Q61371 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ift88Q61371 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ift88Q61371 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ift88Q61371 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ift88Q61371 Gm22058-201ENSMUST00000083393 310 ntBASIC13.6□□□□□ -0.23
Ift88Q61371 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ift88Q61371 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms