Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfaip3Q60769 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfaip3Q60769 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfaip3Q60769 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfaip3Q60769 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfaip3Q60769 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Tnfaip3Q60769 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Gm15808-201ENSMUST00000119046 604 ntBASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Gm14760-201ENSMUST00000121831 999 ntBASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.64□□□□□ -0.55
Tnfaip3Q60769 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfaip3Q60769 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Gm13665-201ENSMUST00000120830 528 ntBASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 AA914427-201ENSMUST00000193194 1166 ntBASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Gm44958-201ENSMUST00000203734 736 ntBASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.63□□□□□ -0.55
Tnfaip3Q60769 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms