Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
ClpbQ60649 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClpbQ60649 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.86□□□□□ -0.51
ClpbQ60649 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.86□□□□□ -0.51
ClpbQ60649 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
ClpbQ60649 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.86□□□□□ -0.51
ClpbQ60649 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
ClpbQ60649 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.85□□□□□ -0.51
ClpbQ60649 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
ClpbQ60649 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.85□□□□□ -0.51
ClpbQ60649 Gm13350-201ENSMUST00000120519 479 ntBASIC11.85□□□□□ -0.51
ClpbQ60649 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 Gm11964-201ENSMUST00000120982 444 ntBASIC11.85□□□□□ -0.51
ClpbQ60649 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.85□□□□□ -0.51
ClpbQ60649 Gm13316-201ENSMUST00000140537 691 ntBASIC11.85□□□□□ -0.51
ClpbQ60649 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.85□□□□□ -0.51
ClpbQ60649 Gm26956-201ENSMUST00000182176 986 ntBASIC11.85□□□□□ -0.51
ClpbQ60649 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.85□□□□□ -0.51
ClpbQ60649 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.85□□□□□ -0.51
ClpbQ60649 Gm43758-201ENSMUST00000199500 367 ntBASIC11.85□□□□□ -0.51
ClpbQ60649 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.85□□□□□ -0.51
ClpbQ60649 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.85□□□□□ -0.51
ClpbQ60649 Gm45925-201ENSMUST00000218882 744 ntBASIC11.85□□□□□ -0.51
ClpbQ60649 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
ClpbQ60649 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
ClpbQ60649 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
ClpbQ60649 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
ClpbQ60649 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
ClpbQ60649 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClpbQ60649 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.84□□□□□ -0.51
ClpbQ60649 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.84□□□□□ -0.51
ClpbQ60649 Gm16296-201ENSMUST00000159905 325 ntBASIC11.84□□□□□ -0.51
ClpbQ60649 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
ClpbQ60649 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Gm21769-201ENSMUST00000211922 111 ntBASIC11.84□□□□□ -0.51
ClpbQ60649 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
ClpbQ60649 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
ClpbQ60649 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.84□□□□□ -0.51
ClpbQ60649 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
ClpbQ60649 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClpbQ60649 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.84□□□□□ -0.51
ClpbQ60649 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ClpbQ60649 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
ClpbQ60649 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.84□□□□□ -0.51
ClpbQ60649 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms