Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Gm8885-201ENSMUST00000189382 598 ntBASIC11.8□□□□□ -0.52
Xrcc1Q60596 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.8□□□□□ -0.52
Xrcc1Q60596 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.8□□□□□ -0.52
Xrcc1Q60596 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.79□□□□□ -0.52
Xrcc1Q60596 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.79□□□□□ -0.52
Xrcc1Q60596 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.79□□□□□ -0.52
Xrcc1Q60596 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.79□□□□□ -0.52
Xrcc1Q60596 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.79□□□□□ -0.52
Xrcc1Q60596 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Gm10312-201ENSMUST00000078515 489 ntBASIC11.79□□□□□ -0.52
Xrcc1Q60596 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Xrcc1Q60596 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xrcc1Q60596 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xrcc1Q60596 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Xrcc1Q60596 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Xrcc1Q60596 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xrcc1Q60596 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xrcc1Q60596 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Xrcc1Q60596 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Xrcc1Q60596 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xrcc1Q60596 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Xrcc1Q60596 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Xrcc1Q60596 Gm14109-201ENSMUST00000118814 309 ntBASIC11.78□□□□□ -0.52
Xrcc1Q60596 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Xrcc1Q60596 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Xrcc1Q60596 Gm27046-201ENSMUST00000182160 463 ntBASIC11.78□□□□□ -0.52
Xrcc1Q60596 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.78□□□□□ -0.52
Xrcc1Q60596 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms