Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Gm23200-201ENSMUST00000104379 132 ntBASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Gm9083-201ENSMUST00000120423 819 ntBASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shroom1Q5SX79 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Rmrp-201ENSMUST00000157463 271 ntBASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.12□□□□□ -0.31
Shroom1Q5SX79 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.12□□□□□ -0.31
Shroom1Q5SX79 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Matn2-203ENSMUST00000226766 3252 ntBASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Gm12266-201ENSMUST00000120311 962 ntBASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Gm24749-201ENSMUST00000157838 343 ntBASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Gm22902-201ENSMUST00000158488 302 ntBASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Gm17040-202ENSMUST00000170597 889 ntBASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Gm37666-201ENSMUST00000194110 866 ntBASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Gm43378-201ENSMUST00000199336 582 ntBASIC13.11□□□□□ -0.31
Shroom1Q5SX79 Gm17812-201ENSMUST00000204935 318 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms