Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Rprl1-201ENSMUST00000158050 327 ntBASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Gm32999-201ENSMUST00000192693 562 ntBASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Gm44124-201ENSMUST00000204159 472 ntBASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Gm8913-201ENSMUST00000209491 641 ntBASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Vps54Q5SPW0 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps54Q5SPW0 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Vps54Q5SPW0 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Vps54Q5SPW0 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Vps54Q5SPW0 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Vps54Q5SPW0 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Vps54Q5SPW0 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Vps54Q5SPW0 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.77□□□□□ -0.04
Vps54Q5SPW0 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps54Q5SPW0 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Vps54Q5SPW0 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps54Q5SPW0 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps54Q5SPW0 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Vps54Q5SPW0 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Vps54Q5SPW0 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps54Q5SPW0 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Gm11989-201ENSMUST00000117240 672 ntBASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Gm11362-201ENSMUST00000118838 850 ntBASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps54Q5SPW0 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Gm13996-201ENSMUST00000118456 430 ntBASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Gm12997-201ENSMUST00000120207 640 ntBASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Gm29199-201ENSMUST00000187766 775 ntBASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Gm7003-201ENSMUST00000195089 312 ntBASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Mir433-201ENSMUST00000093564 124 ntBASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps54Q5SPW0 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms