Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm44124-201ENSMUST00000204159 472 ntBASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm17831-201ENSMUST00000205579 900 ntBASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Snora73b-201ENSMUST00000083419 205 ntBASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 AC158355.1-201ENSMUST00000215895 1705 ntBASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm14644-201ENSMUST00000116671 647 ntBASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm17931-201ENSMUST00000208132 634 ntBASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm3765-201ENSMUST00000130985 1447 ntBASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88aQ5SNZ0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm28071-201ENSMUST00000190355 478 ntBASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm44882-201ENSMUST00000205702 802 ntBASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm7541-201ENSMUST00000118361 535 ntBASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm13937-201ENSMUST00000121000 988 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms