Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Gm2965-201ENSMUST00000198365 343 ntBASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Gm18711-201ENSMUST00000199341 750 ntBASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.97□□□□□ -0.33
Upf3aQ3ULJ3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Gm8566-201ENSMUST00000120174 465 ntBASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Upf3aQ3ULJ3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Upf3aQ3ULJ3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upf3aQ3ULJ3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Upf3aQ3ULJ3 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upf3aQ3ULJ3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upf3aQ3ULJ3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Upf3aQ3ULJ3 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upf3aQ3ULJ3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Gm12029-201ENSMUST00000120073 832 ntBASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Gm10774-201ENSMUST00000188689 204 ntBASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms