Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Gm28833-201ENSMUST00000189671 559 ntBASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Gm7082-201ENSMUST00000209880 969 ntBASIC11.3□□□□□ -0.6
Spg11Q3UHA3 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Gm9791-201ENSMUST00000060997 447 ntBASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Spg11Q3UHA3 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Gm11996-201ENSMUST00000117538 915 ntBASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Gm13827-201ENSMUST00000148801 372 ntBASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Gm24328-201ENSMUST00000175104 67 ntBASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Gm5650-201ENSMUST00000209641 598 ntBASIC11.29□□□□□ -0.6
Spg11Q3UHA3 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Gm5395-201ENSMUST00000121650 915 ntBASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Gm8824-201ENSMUST00000182962 990 ntBASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Gm43506-201ENSMUST00000200675 753 ntBASIC11.29□□□□□ -0.6
Spg11Q3UHA3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Gm43852-201ENSMUST00000202098 917 ntBASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Spg11Q3UHA3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Gm23612-201ENSMUST00000103823 110 ntBASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Gm14270-201ENSMUST00000118388 846 ntBASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Gm23576-201ENSMUST00000179918 110 ntBASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Spg11Q3UHA3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms