Protein–RNA interactions for Protein: Q3UEB3

Puf60, Poly(U)-binding-splicing factor PUF60, mousemouse

Known RBP Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Puf60Q3UEB3 AC098716.1-201ENSMUST00000213527 703 ntBASIC16.85■□□□□ 0.29
Puf60Q3UEB3 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Puf60Q3UEB3 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Puf60Q3UEB3 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Puf60Q3UEB3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Puf60Q3UEB3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Puf60Q3UEB3 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC16.85■□□□□ 0.29
Puf60Q3UEB3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Puf60Q3UEB3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Puf60Q3UEB3 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Puf60Q3UEB3 Gm14150-201ENSMUST00000122404 1354 ntBASIC16.85■□□□□ 0.29
Puf60Q3UEB3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Puf60Q3UEB3 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Puf60Q3UEB3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Puf60Q3UEB3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Puf60Q3UEB3 Gm42928-201ENSMUST00000197338 3339 ntBASIC16.85■□□□□ 0.29
Puf60Q3UEB3 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Puf60Q3UEB3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Puf60Q3UEB3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Gm45575-201ENSMUST00000210283 548 ntBASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Puf60Q3UEB3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Puf60Q3UEB3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Puf60Q3UEB3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
Puf60Q3UEB3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Puf60Q3UEB3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Puf60Q3UEB3 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Puf60Q3UEB3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Puf60Q3UEB3 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Puf60Q3UEB3 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Puf60Q3UEB3 Gm14460-201ENSMUST00000121511 639 ntBASIC16.83■□□□□ 0.28
Puf60Q3UEB3 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Puf60Q3UEB3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Puf60Q3UEB3 Gm22144-201ENSMUST00000157402 102 ntBASIC16.83■□□□□ 0.28
Puf60Q3UEB3 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC16.83■□□□□ 0.28
Puf60Q3UEB3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Puf60Q3UEB3 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC16.83■□□□□ 0.28
Puf60Q3UEB3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
Puf60Q3UEB3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Puf60Q3UEB3 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Puf60Q3UEB3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Puf60Q3UEB3 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC16.83■□□□□ 0.28
Puf60Q3UEB3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Puf60Q3UEB3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Puf60Q3UEB3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Puf60Q3UEB3 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Puf60Q3UEB3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
Puf60Q3UEB3 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Puf60Q3UEB3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Puf60Q3UEB3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Puf60Q3UEB3 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Puf60Q3UEB3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Puf60Q3UEB3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC16.82■□□□□ 0.28
Puf60Q3UEB3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Puf60Q3UEB3 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Puf60Q3UEB3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Puf60Q3UEB3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Puf60Q3UEB3 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Puf60Q3UEB3 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC16.82■□□□□ 0.28
Puf60Q3UEB3 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC16.82■□□□□ 0.28
Puf60Q3UEB3 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Puf60Q3UEB3 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
Puf60Q3UEB3 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Puf60Q3UEB3 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Puf60Q3UEB3 Gm4034-201ENSMUST00000187674 480 ntBASIC16.82■□□□□ 0.28
Puf60Q3UEB3 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Puf60Q3UEB3 Gm10752-201ENSMUST00000218348 729 ntBASIC16.82■□□□□ 0.28
Puf60Q3UEB3 AC153937.1-201ENSMUST00000218734 412 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms