Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim63Q38HM4 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Trim63Q38HM4 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Gm7222-201ENSMUST00000117512 906 ntBASIC10.09□□□□□ -0.79
Trim63Q38HM4 Gm12895-201ENSMUST00000122214 226 ntBASIC10.09□□□□□ -0.79
Trim63Q38HM4 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.09□□□□□ -0.79
Trim63Q38HM4 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim63Q38HM4 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.08□□□□□ -0.8
Trim63Q38HM4 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Gm13823-201ENSMUST00000119930 345 ntBASIC10.08□□□□□ -0.8
Trim63Q38HM4 Gm11764-201ENSMUST00000120221 623 ntBASIC10.08□□□□□ -0.8
Trim63Q38HM4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Gm4899-201ENSMUST00000178708 719 ntBASIC10.08□□□□□ -0.8
Trim63Q38HM4 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC10.08□□□□□ -0.8
Trim63Q38HM4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Gm7441-201ENSMUST00000220697 1074 ntBASIC10.08□□□□□ -0.8
Trim63Q38HM4 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim63Q38HM4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trim63Q38HM4 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms