Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ush2AQ2QI47 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Gm23479-201ENSMUST00000158876 122 ntBASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Gm4891-201ENSMUST00000182279 912 ntBASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Gm19931-201ENSMUST00000198920 368 ntBASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Gm45808-201ENSMUST00000210701 789 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Fibp-201ENSMUST00000025847 1215 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Olfr403-201ENSMUST00000076675 942 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Olfr43-201ENSMUST00000078936 1092 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Gm37513-201ENSMUST00000194830 2268 ntBASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Gm38378-201ENSMUST00000195153 2268 ntBASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Odam-201ENSMUST00000113274 872 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Gm12424-201ENSMUST00000179673 447 ntBASIC6.29□□□□□ -1.4
Ush2AQ2QI47 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Gm9574-201ENSMUST00000173127 845 ntBASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Gm8488-201ENSMUST00000176112 1280 ntBASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Gm6291-201ENSMUST00000179994 309 ntBASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Id2-203ENSMUST00000222667 958 ntBASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Gm8111-201ENSMUST00000117659 987 ntBASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Gm6939-201ENSMUST00000122029 864 ntBASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Gm17799-201ENSMUST00000183270 667 ntBASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 AC154506.2-201ENSMUST00000225481 1276 ntBASIC6.29□□□□□ -1.4
Ush2AQ2QI47 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 AC093022.4-203ENSMUST00000228523 2657 ntBASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Gm2328-201ENSMUST00000193525 535 ntBASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Gm6794-201ENSMUST00000203829 457 ntBASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Gm21054-201ENSMUST00000203981 380 ntBASIC6.29□□□□□ -1.4
Ush2AQ2QI47 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Ush2AQ2QI47 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms