Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC12.36□□□□□ -0.43
Col9a1Q05722 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC12.36□□□□□ -0.43
Col9a1Q05722 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.36□□□□□ -0.43
Col9a1Q05722 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 AC126673.2-201ENSMUST00000221052 686 ntBASIC12.36□□□□□ -0.43
Col9a1Q05722 AC159293.2-201ENSMUST00000222289 424 ntBASIC12.36□□□□□ -0.43
Col9a1Q05722 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col9a1Q05722 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col9a1Q05722 Gm807-202ENSMUST00000224929 408 ntBASIC12.36□□□□□ -0.43
Col9a1Q05722 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col9a1Q05722 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Col9a1Q05722 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Col9a1Q05722 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Col9a1Q05722 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Col9a1Q05722 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col9a1Q05722 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Col9a1Q05722 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Col9a1Q05722 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.35□□□□□ -0.43
Col9a1Q05722 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Gm11619-201ENSMUST00000117474 237 ntBASIC12.35□□□□□ -0.43
Col9a1Q05722 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Gm12030-201ENSMUST00000121917 223 ntBASIC12.35□□□□□ -0.43
Col9a1Q05722 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC12.35□□□□□ -0.43
Col9a1Q05722 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.35□□□□□ -0.43
Col9a1Q05722 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC12.35□□□□□ -0.43
Col9a1Q05722 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC12.35□□□□□ -0.43
Col9a1Q05722 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.35□□□□□ -0.43
Col9a1Q05722 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.35□□□□□ -0.43
Col9a1Q05722 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Mir8115-201ENSMUST00000184992 119 ntBASIC12.35□□□□□ -0.43
Col9a1Q05722 Gm20914-202ENSMUST00000188887 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Col9a1Q05722 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC12.35□□□□□ -0.43
Col9a1Q05722 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC12.35□□□□□ -0.43
Col9a1Q05722 AC162934.3-201ENSMUST00000223015 841 ntBASIC12.35□□□□□ -0.43
Col9a1Q05722 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.35□□□□□ -0.43
Col9a1Q05722 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.35□□□□□ -0.43
Col9a1Q05722 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Col9a1Q05722 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC12.35□□□□□ -0.43
Col9a1Q05722 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Col9a1Q05722 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
Col9a1Q05722 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.35□□□□□ -0.43
Col9a1Q05722 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Col9a1Q05722 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a1Q05722 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Col9a1Q05722 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.34□□□□□ -0.43
Col9a1Q05722 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Col9a1Q05722 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a1Q05722 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms