Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.75□□□□□ -0.37
Sox9Q04887 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.75□□□□□ -0.37
Sox9Q04887 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.75□□□□□ -0.37
Sox9Q04887 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.75□□□□□ -0.37
Sox9Q04887 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.75□□□□□ -0.37
Sox9Q04887 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox9Q04887 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox9Q04887 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox9Q04887 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Sox9Q04887 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.75□□□□□ -0.37
Sox9Q04887 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox9Q04887 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox9Q04887 Gm43610-201ENSMUST00000199117 365 ntBASIC12.75□□□□□ -0.37
Sox9Q04887 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.75□□□□□ -0.37
Sox9Q04887 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox9Q04887 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Sox9Q04887 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.75□□□□□ -0.37
Sox9Q04887 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox9Q04887 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox9Q04887 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Sox9Q04887 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox9Q04887 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Sox9Q04887 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox9Q04887 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox9Q04887 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Sox9Q04887 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sox9Q04887 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sox9Q04887 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox9Q04887 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox9Q04887 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Sox9Q04887 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Sox9Q04887 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox9Q04887 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Sox9Q04887 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Sox9Q04887 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Sox9Q04887 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.74□□□□□ -0.37
Sox9Q04887 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Gm24934-201ENSMUST00000103764 111 ntBASIC12.74□□□□□ -0.37
Sox9Q04887 Gm15036-201ENSMUST00000118880 400 ntBASIC12.74□□□□□ -0.37
Sox9Q04887 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.74□□□□□ -0.37
Sox9Q04887 Mir8115-201ENSMUST00000184992 119 ntBASIC12.74□□□□□ -0.37
Sox9Q04887 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.74□□□□□ -0.37
Sox9Q04887 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.74□□□□□ -0.37
Sox9Q04887 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.74□□□□□ -0.37
Sox9Q04887 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.74□□□□□ -0.37
Sox9Q04887 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Sox9Q04887 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Sox9Q04887 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.74□□□□□ -0.37
Sox9Q04887 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sox9Q04887 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox9Q04887 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox9Q04887 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox9Q04887 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox9Q04887 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sox9Q04887 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sox9Q04887 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.73□□□□□ -0.37
Sox9Q04887 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox9Q04887 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox9Q04887 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox9Q04887 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Sox9Q04887 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox9Q04887 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox9Q04887 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox9Q04887 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox9Q04887 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sox9Q04887 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.73□□□□□ -0.37
Sox9Q04887 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.73□□□□□ -0.37
Sox9Q04887 Gm10731-201ENSMUST00000181171 448 ntBASIC12.73□□□□□ -0.37
Sox9Q04887 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.73□□□□□ -0.37
Sox9Q04887 Gm28686-201ENSMUST00000187404 609 ntBASIC12.73□□□□□ -0.37
Sox9Q04887 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox9Q04887 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.73□□□□□ -0.37
Sox9Q04887 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox9Q04887 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms