Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.64□□□□□ -0.23
Col6a1Q04857 Gm23153-201ENSMUST00000175323 313 ntBASIC13.64□□□□□ -0.23
Col6a1Q04857 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a1Q04857 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a1Q04857 Gm39404-201ENSMUST00000216350 313 ntBASIC13.64□□□□□ -0.23
Col6a1Q04857 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.64□□□□□ -0.23
Col6a1Q04857 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a1Q04857 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a1Q04857 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC13.64□□□□□ -0.23
Col6a1Q04857 Gm25517-201ENSMUST00000083865 134 ntBASIC13.64□□□□□ -0.23
Col6a1Q04857 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Col6a1Q04857 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a1Q04857 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.64□□□□□ -0.23
Col6a1Q04857 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a1Q04857 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a1Q04857 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a1Q04857 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a1Q04857 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a1Q04857 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.64□□□□□ -0.23
Col6a1Q04857 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a1Q04857 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a1Q04857 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.64□□□□□ -0.23
Col6a1Q04857 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a1Q04857 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Col6a1Q04857 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Col6a1Q04857 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Col6a1Q04857 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.63□□□□□ -0.23
Col6a1Q04857 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Col6a1Q04857 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.63□□□□□ -0.23
Col6a1Q04857 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 Gm9230-201ENSMUST00000188228 532 ntBASIC13.63□□□□□ -0.23
Col6a1Q04857 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.63□□□□□ -0.23
Col6a1Q04857 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Col6a1Q04857 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.63□□□□□ -0.23
Col6a1Q04857 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.63□□□□□ -0.23
Col6a1Q04857 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Col6a1Q04857 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Col6a1Q04857 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Col6a1Q04857 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Col6a1Q04857 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.63□□□□□ -0.23
Col6a1Q04857 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.63□□□□□ -0.23
Col6a1Q04857 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Col6a1Q04857 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a1Q04857 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Col6a1Q04857 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a1Q04857 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a1Q04857 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a1Q04857 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a1Q04857 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a1Q04857 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a1Q04857 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.62□□□□□ -0.23
Col6a1Q04857 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a1Q04857 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Col6a1Q04857 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a1Q04857 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a1Q04857 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.62□□□□□ -0.23
Col6a1Q04857 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.62□□□□□ -0.23
Col6a1Q04857 Mir874-201ENSMUST00000104769 76 ntBASIC13.62□□□□□ -0.23
Col6a1Q04857 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a1Q04857 Gm12501-201ENSMUST00000119163 529 ntBASIC13.62□□□□□ -0.23
Col6a1Q04857 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Col6a1Q04857 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Col6a1Q04857 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.62□□□□□ -0.23
Col6a1Q04857 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Col6a1Q04857 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a1Q04857 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Col6a1Q04857 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.62□□□□□ -0.23
Col6a1Q04857 Gm18038-201ENSMUST00000197900 485 ntBASIC13.62□□□□□ -0.23
Col6a1Q04857 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a1Q04857 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.62□□□□□ -0.23
Col6a1Q04857 Gm9463-201ENSMUST00000206707 601 ntBASIC13.62□□□□□ -0.23
Col6a1Q04857 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a1Q04857 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Col6a1Q04857 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.62□□□□□ -0.23
Col6a1Q04857 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.62□□□□□ -0.23
Col6a1Q04857 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a1Q04857 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms