Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx2Q03358 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx2Q03358 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Msx2Q03358 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx2Q03358 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx2Q03358 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx2Q03358 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx2Q03358 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msx2Q03358 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx2Q03358 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx2Q03358 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx2Q03358 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msx2Q03358 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx2Q03358 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Msx2Q03358 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Msx2Q03358 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Msx2Q03358 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msx2Q03358 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.94□□□□□ -0.5
Msx2Q03358 Gm16296-201ENSMUST00000159905 325 ntBASIC11.94□□□□□ -0.5
Msx2Q03358 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx2Q03358 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.94□□□□□ -0.5
Msx2Q03358 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.94□□□□□ -0.5
Msx2Q03358 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.94□□□□□ -0.5
Msx2Q03358 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.94□□□□□ -0.5
Msx2Q03358 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.94□□□□□ -0.5
Msx2Q03358 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.94□□□□□ -0.5
Msx2Q03358 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx2Q03358 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.94□□□□□ -0.5
Msx2Q03358 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx2Q03358 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Msx2Q03358 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx2Q03358 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx2Q03358 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msx2Q03358 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Msx2Q03358 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx2Q03358 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx2Q03358 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx2Q03358 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx2Q03358 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.94□□□□□ -0.5
Msx2Q03358 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Msx2Q03358 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx2Q03358 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msx2Q03358 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx2Q03358 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.93□□□□□ -0.5
Msx2Q03358 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.93□□□□□ -0.5
Msx2Q03358 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx2Q03358 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Msx2Q03358 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx2Q03358 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx2Q03358 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.93□□□□□ -0.5
Msx2Q03358 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Msx2Q03358 Gm12928-201ENSMUST00000117115 573 ntBASIC11.93□□□□□ -0.5
Msx2Q03358 Gm15703-201ENSMUST00000120250 880 ntBASIC11.93□□□□□ -0.5
Msx2Q03358 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.93□□□□□ -0.5
Msx2Q03358 Gm16479-201ENSMUST00000121706 932 ntBASIC11.93□□□□□ -0.5
Msx2Q03358 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx2Q03358 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Msx2Q03358 Gm22121-201ENSMUST00000175148 54 ntBASIC11.93□□□□□ -0.5
Msx2Q03358 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.93□□□□□ -0.5
Msx2Q03358 Gm2495-201ENSMUST00000191160 466 ntBASIC11.93□□□□□ -0.5
Msx2Q03358 Gm20949-201ENSMUST00000206478 952 ntBASIC11.93□□□□□ -0.5
Msx2Q03358 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.93□□□□□ -0.5
Msx2Q03358 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.93□□□□□ -0.5
Msx2Q03358 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.93□□□□□ -0.5
Msx2Q03358 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Msx2Q03358 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.93□□□□□ -0.5
Msx2Q03358 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx2Q03358 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx2Q03358 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx2Q03358 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Msx2Q03358 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx2Q03358 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx2Q03358 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx2Q03358 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx2Q03358 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx2Q03358 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Msx2Q03358 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.93□□□□□ -0.5
Msx2Q03358 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx2Q03358 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx2Q03358 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Msx2Q03358 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
Msx2Q03358 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Msx2Q03358 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx2Q03358 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Msx2Q03358 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.92□□□□□ -0.5
Msx2Q03358 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.92□□□□□ -0.5
Msx2Q03358 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Msx2Q03358 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx2Q03358 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Msx2Q03358 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Msx2Q03358 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Msx2Q03358 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Msx2Q03358 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx2Q03358 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx2Q03358 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Msx2Q03358 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx2Q03358 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Msx2Q03358 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx2Q03358 Snord83b-201ENSMUST00000104546 94 ntBASIC11.92□□□□□ -0.5
Msx2Q03358 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms