Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Gm42433-201ENSMUST00000196806 940 ntBASIC17.11■□□□□ 0.33
Xrn1P97789 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Xrn1P97789 Gm3433-201ENSMUST00000210149 1058 ntBASIC17.11■□□□□ 0.33
Xrn1P97789 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Xrn1P97789 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Xrn1P97789 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Xrn1P97789 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Xrn1P97789 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Xrn1P97789 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Xrn1P97789 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC17.11■□□□□ 0.33
Xrn1P97789 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Xrn1P97789 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC17.11■□□□□ 0.33
Xrn1P97789 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Xrn1P97789 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Xrn1P97789 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Xrn1P97789 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Xrn1P97789 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Xrn1P97789 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Xrn1P97789 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Xrn1P97789 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Xrn1P97789 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Xrn1P97789 Gm14213-201ENSMUST00000119778 768 ntBASIC17.1■□□□□ 0.33
Xrn1P97789 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Xrn1P97789 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Xrn1P97789 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Xrn1P97789 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Xrn1P97789 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Xrn1P97789 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Xrn1P97789 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Xrn1P97789 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Xrn1P97789 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Xrn1P97789 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Xrn1P97789 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Xrn1P97789 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Xrn1P97789 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Xrn1P97789 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Xrn1P97789 Gm9673-201ENSMUST00000119287 781 ntBASIC17.1■□□□□ 0.33
Xrn1P97789 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Xrn1P97789 Mir6923-201ENSMUST00000184592 72 ntBASIC17.1■□□□□ 0.33
Xrn1P97789 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC17.1■□□□□ 0.33
Xrn1P97789 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC17.1■□□□□ 0.33
Xrn1P97789 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Xrn1P97789 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Xrn1P97789 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Xrn1P97789 Gm18798-201ENSMUST00000187264 1700 ntBASIC17.09■□□□□ 0.33
Xrn1P97789 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC17.09■□□□□ 0.33
Xrn1P97789 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Xrn1P97789 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Xrn1P97789 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Xrn1P97789 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC17.09■□□□□ 0.33
Xrn1P97789 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Xrn1P97789 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Xrn1P97789 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Xrn1P97789 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Xrn1P97789 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Xrn1P97789 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Xrn1P97789 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Xrn1P97789 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Xrn1P97789 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Xrn1P97789 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.09■□□□□ 0.33
Xrn1P97789 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Xrn1P97789 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Xrn1P97789 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Xrn1P97789 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC17.09■□□□□ 0.33
Xrn1P97789 Gm12194-201ENSMUST00000117756 1012 ntBASIC17.09■□□□□ 0.33
Xrn1P97789 Gm12036-201ENSMUST00000120008 530 ntBASIC17.09■□□□□ 0.33
Xrn1P97789 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Xrn1P97789 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Xrn1P97789 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Xrn1P97789 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC17.09■□□□□ 0.33
Xrn1P97789 Gm7902-201ENSMUST00000198842 947 ntBASIC17.09■□□□□ 0.33
Xrn1P97789 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Xrn1P97789 Gm19640-201ENSMUST00000214849 464 ntBASIC17.09■□□□□ 0.33
Xrn1P97789 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Xrn1P97789 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC17.09■□□□□ 0.33
Xrn1P97789 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Xrn1P97789 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Xrn1P97789 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC17.09■□□□□ 0.33
Xrn1P97789 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Xrn1P97789 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Xrn1P97789 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Xrn1P97789 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Xrn1P97789 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Xrn1P97789 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Xrn1P97789 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Xrn1P97789 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Xrn1P97789 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC17.08■□□□□ 0.33
Xrn1P97789 Gm11619-201ENSMUST00000117474 237 ntBASIC17.08■□□□□ 0.32
Xrn1P97789 Gm11979-201ENSMUST00000119629 743 ntBASIC17.08■□□□□ 0.32
Xrn1P97789 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC17.08■□□□□ 0.32
Xrn1P97789 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC17.08■□□□□ 0.32
Xrn1P97789 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC17.08■□□□□ 0.32
Xrn1P97789 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC17.08■□□□□ 0.32
Xrn1P97789 Gm44124-201ENSMUST00000204159 472 ntBASIC17.08■□□□□ 0.32
Xrn1P97789 Gm5996-201ENSMUST00000211110 718 ntBASIC17.08■□□□□ 0.32
Xrn1P97789 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Xrn1P97789 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Xrn1P97789 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Xrn1P97789 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Xrn1P97789 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms