Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.57□□□□□ -0.4
Thumpd3P97770 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.56□□□□□ -0.4
Thumpd3P97770 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd3P97770 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd3P97770 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Thumpd3P97770 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Thumpd3P97770 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd3P97770 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd3P97770 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd3P97770 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Thumpd3P97770 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd3P97770 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Thumpd3P97770 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Thumpd3P97770 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd3P97770 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd3P97770 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd3P97770 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd3P97770 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.56□□□□□ -0.4
Thumpd3P97770 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd3P97770 Gm9823-201ENSMUST00000051212 327 ntBASIC12.56□□□□□ -0.4
Thumpd3P97770 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd3P97770 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd3P97770 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd3P97770 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Thumpd3P97770 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd3P97770 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd3P97770 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.56□□□□□ -0.4
Thumpd3P97770 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.56□□□□□ -0.4
Thumpd3P97770 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd3P97770 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd3P97770 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd3P97770 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd3P97770 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thumpd3P97770 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Thumpd3P97770 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.55□□□□□ -0.4
Thumpd3P97770 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.55□□□□□ -0.4
Thumpd3P97770 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.55□□□□□ -0.4
Thumpd3P97770 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.55□□□□□ -0.4
Thumpd3P97770 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.55□□□□□ -0.4
Thumpd3P97770 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.55□□□□□ -0.4
Thumpd3P97770 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thumpd3P97770 Map1b-203ENSMUST00000223725 2669 ntBASIC12.55□□□□□ -0.4
Thumpd3P97770 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Thumpd3P97770 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd3P97770 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.54□□□□□ -0.4
Thumpd3P97770 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd3P97770 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd3P97770 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Thumpd3P97770 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Thumpd3P97770 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd3P97770 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd3P97770 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd3P97770 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd3P97770 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.54□□□□□ -0.4
Thumpd3P97770 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd3P97770 Gm8805-201ENSMUST00000117848 313 ntBASIC12.54□□□□□ -0.4
Thumpd3P97770 Gm14704-201ENSMUST00000120300 874 ntBASIC12.54□□□□□ -0.4
Thumpd3P97770 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd3P97770 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.54□□□□□ -0.4
Thumpd3P97770 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.54□□□□□ -0.4
Thumpd3P97770 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Thumpd3P97770 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.54□□□□□ -0.4
Thumpd3P97770 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.54□□□□□ -0.4
Thumpd3P97770 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms