Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Nkx3-2P97503 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkx3-2P97503 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.7□□□□□ -0.54
Nkx3-2P97503 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.69□□□□□ -0.54
Nkx3-2P97503 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.69□□□□□ -0.54
Nkx3-2P97503 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Gm12314-201ENSMUST00000118104 538 ntBASIC11.69□□□□□ -0.54
Nkx3-2P97503 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.69□□□□□ -0.54
Nkx3-2P97503 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Gm2383-201ENSMUST00000181461 807 ntBASIC11.69□□□□□ -0.54
Nkx3-2P97503 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.69□□□□□ -0.54
Nkx3-2P97503 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Mir433-201ENSMUST00000093564 124 ntBASIC11.69□□□□□ -0.54
Nkx3-2P97503 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx3-2P97503 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.68□□□□□ -0.54
Nkx3-2P97503 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.68□□□□□ -0.54
Nkx3-2P97503 Gm14017-201ENSMUST00000121934 386 ntBASIC11.68□□□□□ -0.54
Nkx3-2P97503 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Nkx3-2P97503 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms