Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Npas1P97459 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.36□□□□□ -0.75
Npas1P97459 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Npas1P97459 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Npas1P97459 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Npas1P97459 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Npas1P97459 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Npas1P97459 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Npas1P97459 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.35□□□□□ -0.75
Npas1P97459 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Npas1P97459 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.35□□□□□ -0.75
Npas1P97459 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Npas1P97459 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Npas1P97459 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Npas1P97459 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Npas1P97459 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Npas1P97459 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Npas1P97459 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Npas1P97459 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.35□□□□□ -0.75
Npas1P97459 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.35□□□□□ -0.75
Npas1P97459 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.35□□□□□ -0.75
Npas1P97459 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Npas1P97459 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Npas1P97459 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Npas1P97459 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.35□□□□□ -0.75
Npas1P97459 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.35□□□□□ -0.75
Npas1P97459 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.35□□□□□ -0.75
Npas1P97459 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.35□□□□□ -0.75
Npas1P97459 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Npas1P97459 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Npas1P97459 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Npas1P97459 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Npas1P97459 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Npas1P97459 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Npas1P97459 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Npas1P97459 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Npas1P97459 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Npas1P97459 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Npas1P97459 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Npas1P97459 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Npas1P97459 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Npas1P97459 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.35□□□□□ -0.75
Npas1P97459 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Npas1P97459 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.35□□□□□ -0.75
Npas1P97459 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Npas1P97459 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Npas1P97459 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Npas1P97459 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.34□□□□□ -0.75
Npas1P97459 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Npas1P97459 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.34□□□□□ -0.75
Npas1P97459 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.34□□□□□ -0.75
Npas1P97459 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.34□□□□□ -0.75
Npas1P97459 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.34□□□□□ -0.75
Npas1P97459 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.34□□□□□ -0.75
Npas1P97459 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.34□□□□□ -0.75
Npas1P97459 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.34□□□□□ -0.75
Npas1P97459 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.34□□□□□ -0.75
Npas1P97459 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Npas1P97459 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Npas1P97459 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.34□□□□□ -0.75
Npas1P97459 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Npas1P97459 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms